BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G12LP1|AL425932
(843 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1317 1618 0.0
>3x_Contig1317
Length = 5616
Score = 1618 bits (813), Expect = 0.0
Identities = 833/843 (98%)
Strand = Plus / Plus
Query: 1 ttgatatgtgtccaaaggtagcttgtacaaaggcccatcagcttcagacatgtttcgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2053 ttgatatgtgtccaaaggtagcttgtacaaaggcccatcagcttcagacatgtttcgcaa 2112
Query: 61 acaaatcactgatgccagtcattaccaattgatgaagctttggctgtgttctttgttctt 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2113 acaaatcactgatgccagtaattaccaattgatgaagctttggctgtgttctttgttctt 2172
Query: 121 actgggctgttctgccgcgtttttcttattttgtttcctattccttatatcgaatttata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2173 actgggctgttctgccgcgtttttcttattttgtttcctattccttatatcgaatttata 2232
Query: 181 aacctgattttttatgtaagagagtcatgtatgamataaaataaagtgctaacagaacgt 240
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 2233 aacctgattttttatgtaagagagttatgtatgaaataaaataaagtgctaacagaacgt 2292
Query: 241 tgtaaactctacaatagacatcgatttagtttagagtataaatgtgcyaaggaataattt 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2293 tgtaaactctacaatagacatcgatttagtttagagtataaatgtgctaaggaataattt 2352
Query: 301 cgaaaacagtacaatcatgaagaatgaatcatagcgaattgaaagaatgaatgcyattga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2353 cgaaaacagtacaatcatgaagaatgaatcatagcgaattgaaagaatgaatgctattga 2412
Query: 361 attgaagaaatatattaatgagatcatagaaggtggatctcattttactctgccttttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2413 attgaagaaatatattaatgagatcatagaaggtggatctcattttactctgccttttgt 2472
Query: 421 cccttatcgtcagccttgccatcttttccatcttctttcttagactttgtaatgacttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2473 cccttatcgtcagccttgccatcttttccatcttctttcttagactttgtaatgacttcc 2532
Query: 481 tttaaggacttgaaaaatgctgtaaaagtaacaacagtgattggcccaagtaatggcaaa 540
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2533 tttaaggacttgaaaaatgctgtaaaagtaacaacagttattggcccaagtaatggcaaa 2592
Query: 541 tagacagcmatcttgtgttcttgtgggaagaatgtctgtcgaaccatttctttgtggaaa 600
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2593 tagacagcaatcttgtgttcttgtgggaagaatgtctgttgaaccatttctttgtggaaa 2652
Query: 601 aatgcacgcgcacatatttttacaagtctattagagagccttaatgcttcgttccagatt 660
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2653 aatgcacgctcacatatttttacaagtctattagagagccttaatgcttcgttccagatt 2712
Query: 661 tcatcactgccaagttcggggttgttcaaaaggtccacgatctgcaatctgagatttaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2713 tcatcactgccaagttcggggttgttcaaaaggtccacgatctgcaatctgagatttaat 2772
Query: 721 gcattgttgacgtcttcgagaacttcccttggaatagacatttgttgtaaatgattcgtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2773 gcattgttgacgtcttcgagaacttcccttggaatagacatttgttgtaaatgattcgtc 2832
Query: 781 atactaactaaagaggataaagtagtgacacttttctccaagttatcaawaatgactttc 840
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2833 atactaactaaagaggataaagtagtgacacttttctccaagttatcaataatgactttc 2892
Query: 841 ctc 843
|||
Sbjct: 2893 ctc 2895
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6753
Number of Sequences: 1807
Number of extensions: 6753
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 843
length of database: 10,358,551
effective HSP length: 16
effective length of query: 827
effective length of database: 10,329,639
effective search space: 8542611453
effective search space used: 8542611453
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)